Computes contiguous candidate groups on a lattice R^d
lattice_peps.Rd
Computes contiguous candidate groups on a lattice R^d
Usage
lattice_peps(
locs,
grid_sizes,
extra_centers = NULL,
max_pep = 0.25,
shape = "square",
log_interval = NULL
)
Arguments
- locs
A (N, num_disc, d)-dimensional array. Here, N is the number of samples from the posterior, d is the number of dimensions of the space, and each point corresponds to a signal in a particular posterior sample.
- grid_sizes
List of grid sizes to split up the locations. The grid size is inversely proportional to the distance between lattice points.
- extra_centers
An (ncenters, d)-dimensional matrix. At each resolution, candidate groups will be computed with centers at this location.
- max_pep
The maximum allowable PEP for output candidate groups. Defaults to 0.25.
- shape
One of ('circle', 'square').
- log_interval
if not NULL, will log progress every log_interval updates.